2006 Schedule (26-23, 15-14)
| Date | Opponent | Location | Result |
| Feb. 26 | at West Florida | Pensacola, Fla. | L, 10-9 |
| Feb. 28 | at West Florida | Pensacola, Fla. | W, 12-9; L, 0-1 |
| Mar. 1 | at West Florida | Pensacola, Fla | L, 2-5 |
| March 2 | at Montevallo | Montevallo, Ala. | L, 7-8 |
| March 3 | a tMontevallo | Montevallo, Ala. | W, 6-4 |
| March 4 | at Montevallo | Montevallo, Ala. | L, 7-12 |
| March 9 | Rockhurst | Bearcat Field | W, 9-4 |
| March 11 | Nebraska-Omaha | Bearcat Field | L, 4-11; W, 11-8 |
| March 15 | Peru State | Bearcat Field | W, 15-10 |
| March 17 | Wayne State | Bearcat Field | W, 8-4; L, 0-10 |
| March 25 | at Missouri Western* | St. Joseph, Mo. | L, 0-5; L, 1-11 |
| March 26 | at Emporia State* | Emporia, Kan. | L, 2-13; L, 11-12 |
| March 29 | Missouri Western* | Bearcat Field | W, 4-2; L, 4-5 |
| April 1 | at Nebraska-Omaha | Omaha, Neb. | L, 4-7; L, 7-8 |
| April 3 | at Truman* | Kirksville, Mo. | W, 2-1; W, 11-8 (10) |
| April 5 | No. 8 Emporia State* | Bearcat Field | L, 0-2; L, 3-6 |
| April 7 | Missouri Southern* | Joplin, Mo. | W, 14-7 |
| April 8 | at Missouri Southern* | Joplin, Mo. | L, 4-5; W, 7-0 |
| April 9 | at Missouri Southern* | Joplin, Mo. | W, 18-10 |
| April 11 | at Washburn* | Topeka, Kan. | L, 8-9; L, 6-8 |
| April 14 | Pittsburg State* | Bearcat Field | L, 9-12; L, 14-24 |
| April 15 | Pittsburg State* | Bearcat Field | W, 3-1; W, 4-1 |
| April 19 | at William Jewell | Liberty, Mo. | W, 12-9 |
| April 22 | Upper Iowa | Bearcat Field | W, 19-5; W, 13-7 |
| April 23 | Upper Iowa | Bearcat Field | W, 9-8; W, 5-4 |
| April 26 | Truman* | Bearcat Field | W, 17-2; W, 7-5 |
| April 28 | at Southwest Baptist* | Bolivar, Mo. | W, 14-0 |
| May 2 | Washburn* | Bearcat Field | W, 3-0; L, 6-8 |
| May 5 | Central Missouri* | Bearcat Field | W, 8-0 |
| May 6 | Central Missouri* | Bearcat Field | W, 4-3; W, 8-7 |
| May 7 | Central Missouri* | Bearcat Field | L, 6-10 |
* = MIAA Games
Home events in green are played at Bearcat Field in Maryville, Mo.
